I’m wondering if there is an option for mrview that will let me set the intensity windowing and intensity thresholds for an overlay? -intensity_range only applies to images at the moment (from what I can tell).
If it would be possible to have an option of the form
…then I would be extremely grateful. Especially if it could be made to apply only to the “current” overlay, if loading multiple overlays. I would love to be able to:
mrview -load image1.mif -overlay.load image1_overlay1.mif -overlay.colourmap 4 -overlay.intensity 0,27000 -overlay.load image1_overlay2.mif -overlay.colourmap 4 -overlay.intensity 0,8000 -overlay.load… … …
On a more religious note, thank you for using the correct spelling of colour. As an Aussie it makes me feel much better.