I am following the steps for the Fixel-Based Analysis and I need to generate a population template for my 49 FODs. The init_nl_template_mask.mif was created and the script created the warps_0/subject1.mif file before power maintenance resulted in power loss to my computer.
I am trying to run the population template again using the -continue option. However, I had an error that the linear_transforms_0/subject1.txtdecomp could not be found. I manually created the .txtdecomp files for linear_transforms_0 to linear_transforms_5. However, it keeps bugging stating there is no such file or directory for warps_15/subject1.mif. Could you please tell me how I should go about this. I don’t want to start from the beginning since it has already taken 1 week to get to this point.