Hi All,
I’m getting the following error when running the “./package_mrtrix -standalone”. I’m compiling on Centos 7 and moving to Centos 6. The software builds with no errors on Centos7.
mrtrix3]# ./package_mrtrix -standalone
This script collates all the executables and runtime dependencies needed for
MRtrix3, and creates a GZ compressed archive suitable for deployment on other
systems. It takes all executables found in the bin/ folder and the MRtrix3
library from the lib/ folder. It is up to the user to ./configure and ./build
the software first.
Stand-alone installation on systems without necessary dependencies
================================================================================
If the -standalone option is also supplied, this script will also attempt to
collate system libraries from the current system, allowing you to install onto
a target system without the necessary dependencies. This is particularly useful
for installation on HPC systems and other centrally managed systems that often
run older distributions, and where users have little or no control over the
installation of required packages.
$ ./configure
$ ./build
$ ./package_mrtrix [-standalone]
Press enter to proceed (or Ctrl-C to abort)...
- collating MRtrix3 executables and library...
- collating dependent system libraries...
bin/5tt2gmwmi: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /usr/local/mrtrix3/bin/../lib/libmrtrix.so)
bin/5tt2vis: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /usr/local/mrtrix3/bin/../lib/libmrtrix.so)
bin/5ttcheck: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by bin/5ttcheck)
bin/5ttcheck: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /usr/local/mrtrix3/bin/../lib/libmrtrix.so)
bin/5ttedit: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /usr/local/mrtrix3/bin/../lib/libmrtrix.so)
bin/afdconnectivity: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by bin/afdconnectivity)
bin/afdconnectivity: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /usr/local/mrtrix3/bin/../lib/libmrtrix.so)