Hi Rob,
First of all, thank you so much for the time you spent getting back to me - it is really appreciated.
I might end up considering the more general question of whether temporal lobectomy changes the brain white matter, but my main question is whether those changes will be different depending on the operated hemisphere.
Understood.
Ahh, I didn’t know this - Yep I will definitely try FOD-based registration and compare to what I already have and draw my conclusions then.
I didn’t express myself very well here - I was probably just thinking of the design that I would apply and whether I should consider any difference images before creating the template. But I think it is better to keep things simple for now.
That was my intuition, but it makes more sense now!
It sounds good! At the moment, I will give it a go with all your useful suggestions and mature my research hypothesis, but I will be sure to reach out if/when it all starts making more sense.
Thank you very much on again.
Cheers
Luís