Could someone point me to documentation regarding the axis flag in
mrdegibbs? the BATMAN tutorial mention:
The “axes” option must be adjusted to your dataset: With this option,you inform the algorithm of the plane inwhich you acquired your data: –axes 0,1means you acquired axial slices; -axes 0,2refers to coronal slices and –axes 1,2 to sagittal slices
However, I am still unsure as to how to interpret the syntax eg
0,-1? doe the phase encode direction matter?