I tried to fix this error, according to Max’s suggestion, and revised my command:
mrtransform wmfod_template.mif -warp mrtrix_warp_wmfod_template2MNI.nii.gz -template FMRIB58_FA.nii.gz wmfod_template_MNI.nii.gz -reorient_fod yes
And it worked, but the effcet was not good.
How can I optimize the result?