Dear MRtrix community,
Is there any way to find the surface coordinate of ROI we have created/imported in MRtrix ?
Thanks.
Parand
Dear MRtrix community,
Is there any way to find the surface coordinate of ROI we have created/imported in MRtrix ?
Thanks.
Parand
Hi Parand,
The question is slightly ambiguous. We don’t yet have the capability to use surface-based ROIs, so there’s no way to export the locations of those vertices that are included in the mask (for voxel-based ROIs, maskdump
provides voxel locations). If you do in fact have surface-based data, I think your problem is missing an internal projection between voxel and surface data representations, which would need the use of tools outside of MRtrix3.
Cheers
Rob