I would like to use
tckedit to filter a tractogram to identify streamlines that traverse ANY inclusion regions in a mask. For example, I have a binary mask with two distinct clusters (cluster A and cluster B). I would like to identify the streamlines that traverse through only cluster A, only cluster B, and cluster A and cluster B. Is this possible?
I’ve seen the
-include spec option. From my understanding, this would only provide the streamlines that traverse through cluster A and cluster B. Is this correct? A workaround would be to run
tckedit -include spec twice for each cluster, however, ideally, I would like to do it in one step.
Apologises if this has been covered elsewhere and I’ve missed it, or if I’ve missed something in the documentation.
Many thanks in advance,