Using ANTs output in mrtransform

Hi all,

I’m having troubles with a subject when registering the FOD map to the FOD template. I normalized this subject using ANTs instead, but now Im not sure if I can just normalize the FOD volume wise. In order to run mrtransform with -noreorientation option, how can I convert the ANTs transformation (affine and warp) to be mrtransform compatible.

Many thanks


Have you seen the entry in the docs?

Now I have