Dear MRtrix developers
I have been trying to run fixel based analysis on mouse DWI sample.
I followed the following site
I have encountered two issues. First .msf file extension does not support. Therefore, fod2fixel produces fixel file along with index and directions files in a directory. Is there any plan to update the instructions given in the aforementioned website?
I also confused how to organise my files while running Fixelcfestats. Is is a folder containing all the individual samples folders/individual file?
I totally lost?
I will appreciate if you please help me in this instance.
Queensland Brain Institute
University of Queensland