I’m having troubles with labelconvert and using the connectome tab from mrview.
1- In labelconvert, I would need some help regarding the parameter ‘lut_out’.
From what I understand, however it’s called ‘out’, it’s an input that should contain some kind of template to guide the modifications that I want to have in my parcellation.
Is that correct ? So I have to manually modify my indices to increment from 1 everytime ?
I have tried the format that you suggest in ‘labelconvert: Explanation & demonstration’ with the colors however labelconvert doesn’t recognize the format.
2- Regarding the visualisation of my connectome:
When I load my parcellation (image output of labelconvert) in Node image, the nodes that I get are all aligned on one sagittal plane.
Am I missing any extra step ? For now in labelconvert lut_out I use the same lut as in lut_in (index and name) but with an increment from one in the indices.
Thanks for your help!