Not to open the new topic.
Nothing wrong with opening new topics; if anything it’s preferable You can always provide a link to another topic if you think it might be relevant.
Is it possible for the
tck2connectomeoutput to be in form of this
Not directly. It could however be achieved with some fairly minimal scripting involving the connectome LUT and matrix data.
Mind you, the connectomes extracted from
tck2connectomeare asymmetric - meaning you may need to symmetrize them for their use in neuromarvl.
tck2connectome by default produces symmetric matrices, but stored in upper triangular format. “Asymmetric” generally refers to when the reflected values are not identical but also not simply zero-filled; i.e. the connectivity from A to B is not identical to the connectivity from B to A.
You can also output symmetric matrices from
tck2connectome using the