Coregistration in MNI space

1

Hello MRtrix experts,

First, thank you so much for this very helpful forum !!!
I would like to coregister T1 images and tck files in MNI space.
I tried in different ways but it doesn’t work.
What are the steps (line command) the most used to coregister T1 images and tck files in MNI space ?
If anyone has insight on what to do it would be much appreciated !

Thanks for reading,
I need some help from you,
Best,

Jennifer

2

Hi,

If you follow the steps on this section Warping tracks files to MNI space using FSL warps you should be able to transform the dwi, the T1w and the tracts to MNI space.

Best regards,

Manuel

3

Hi Manuel,

Thank you so much for your time to me reply.
I will follow explanation on this section very helpful to coregister in MNI space.
Have a good day,

Best,
Jennifer