Hello
I would like to isolate the whole cerebral cortex as a label from DK atlas for the left and white hemisphere, without subdivision into further subregions.
Do you know which labels this corresponds to? For the sake of convenience here is the atlas’ look up table:
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI/FreeSurferColorLUT
I thought if using like label #3 “left cerebral cortex” However, this label does not corresponds to any voxels in the atlas …
thanks in advance,
Rosella
Hi,
I beleive its 1000-2035, the labels prefixed with ‘ctx’, on the aparc+aseg.mgz (Could verify on any viewer like mrview or Freeview).
Regards,
Archith
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