Dear MRtrix team,
I would like to kindly ask for advice, but first some introduction.
We would like to use MRtrix for a large connectomics project for which we recently received funding. We are planning to scan about 8 000 healthy subjects with a HARDI protocol (probably multishell acquisition) on the Cima.X scanner, construct the connectome for individual subjects and finally pool the data to create a normal connectome (age, sex dependent).
We are wondering whether some QA would be beneficial for such a project. We have found a phantom - the Anisotropic Diffusion Phantom by PreOperative Performance. It is designed to track DTI metrics (FA, RD, AD, MD).
We are wondering which (MSMT-)CSD metrics we could use additionally. Two come to my mind:
- the fiber response function (with voxels selected manually)
- the first volume in the FOD image (it is my understanding that this is proportional to the density of the fibers)
My question is: Are there any other metrics we could use?
Thank you very much in advance.
Best regards,
Samuel