Dear Experts,
I am seeking fome clarification on how to threshold the fixel mask to 500,000 which is part of the 7th step of the FBA.
Is this done by simply using the fixelthreshold command?
Where in the command below should the 500,000 be specified?
fod2fixel -mask <input_analysis_voxel_mask> <input_fod_template_image> -peak <output_temp.msf>
fixelthreshold <input_temp.msf> -crop 0.2 <output_analysis_fixel_mask.msf> -force
rm <temp.msf>
Thanks in advance for the help,
James