- The input file appears to be ASCII text :
file fd_files.txt
fd_files.txt: ASCII text, with CR line terminators
- I am trying to start the advanced debugging…
./build select debug
./configure -debug -assert
seems to work fine, and creates the next subdirectories in mrtrix directory:
but as you can see in the image, cannot find bin/command in my files to build in the following step…
./build bin/command
Is it core/command.h file which I should use, to make use of advanced debugging?
- The complete output of fixelcfestats was as following:
Charlottes-MBP:DWI csleur0$ fixelcfestats -negative fd fd_files.txt designMatrix.txt contrastPatLess.txt tracks_2_million_sift.tck stats_fd_PatLess -debug -mask fixel_mask/directions.mif
mkdir: /Volumes/DriveChar/Fossa_Posteriors/DWI/MergedFiles2/normalised/FBA/stats: File exists
fixelcfestats: [DEBUG] No config file found at "/etc/mrtrix.conf"
fixelcfestats: [DEBUG] No config file found at "/Users/csleur0/.mrtrix.conf"
fixelcfestats: [INFO] opening image "fd/index.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/index.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/index.mif" opened with dimensions 123x129x87x2, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998x1, datatype UInt32LE
fixelcfestats: [DEBUG] memory-mapping file "fd/index.mif"...
fixelcfestats: [DEBUG] file "fd/index.mif" mapped at 0x10ca6a000, size 11043432 (read-only)
fixelcfestats: [DEBUG] image "fd/index.mif" loaded
fixelcfestats: [DEBUG] image "fd/index.mif" initialised with strides = [ -2 246 31734 1 ], start = 244, using direct IO
fixelcfestats: number of fixels: 42921
fixelcfestats: [INFO] opening image "fixel_mask/directions.mif"...
fixelcfestats: [DEBUG] reading key/value file "fixel_mask/directions.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fixel_mask/directions.mif" opened with dimensions 42921x3x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [DEBUG] memory-mapping file "fixel_mask/directions.mif"...
fixelcfestats: [DEBUG] file "fixel_mask/directions.mif" mapped at 0x10d526000, size 515052 (read-only)
fixelcfestats: [DEBUG] image "fixel_mask/directions.mif" loaded
fixelcfestats: [DEBUG] image "fixel_mask/directions.mif" initialised with strides = [ -1 42921 128763 ], start = 42920, using indirect IO
fixelcfestats: Fixel mask contains 17859 fixels
fixelcfestats: [INFO] opening image "fd/index.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/index.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/index.mif" opened with dimensions 123x129x87x2, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998x1, datatype UInt32LE
fixelcfestats: [DEBUG] memory-mapping file "fd/index.mif"...
fixelcfestats: [DEBUG] file "fd/index.mif" mapped at 0x10d7a4000, size 11043432 (read-only)
fixelcfestats: [DEBUG] image "fd/index.mif" loaded
fixelcfestats: [DEBUG] image "fd/index.mif" initialised with strides = [ -2 246 31734 1 ], start = 244, using direct IO
fixelcfestats: [INFO] opening image "stats_fd_PatLess/index.mif"...
fixelcfestats: [DEBUG] reading key/value file "stats_fd_PatLess/index.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "stats_fd_PatLess/index.mif" opened with dimensions 123x129x87x2, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998x1, datatype UInt32LE
fixelcfestats: [DEBUG] memory-mapping file "stats_fd_PatLess/index.mif"...
fixelcfestats: [DEBUG] file "stats_fd_PatLess/index.mif" mapped at 0x10e235000, size 11043432 (read-only)
fixelcfestats: [DEBUG] image "stats_fd_PatLess/index.mif" loaded
fixelcfestats: [DEBUG] image "stats_fd_PatLess/index.mif" initialised with strides = [ -2 246 31734 1 ], start = 244, using direct IO
fixelcfestats: [DEBUG] unmapping file "stats_fd_PatLess/index.mif"
fixelcfestats: [DEBUG] image "stats_fd_PatLess/index.mif" unloaded
fixelcfestats: [DEBUG] unmapping file "fd/index.mif"
fixelcfestats: [DEBUG] image "fd/index.mif" unloaded
fixelcfestats: [INFO] opening image "fd/index.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/index.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/index.mif" opened with dimensions 123x129x87x2, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998x1, datatype UInt32LE
fixelcfestats: [INFO] opening image "fd/C01_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C01_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C01_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C02_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C02_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C02_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C04_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C04_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C04_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
...
...
...
fixelcfestats: [INFO] opening image "fd/D03_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D03_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D03_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D04_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D04_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D04_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D05_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D05_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D05_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D06_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D06_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D06_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D07_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D07_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D07_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D08_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D08_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D08_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D09_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D09_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D09_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D10_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D10_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D10_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D11_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D11_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D11_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D12_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D12_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D12_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D13_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D13_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D13_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D14_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D14_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D14_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D15_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D15_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D15_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D16_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D16_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D16_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D17_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D17_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D17_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D18_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D18_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D18_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D19_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D19_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D19_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D21_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D21_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D21_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/directions.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/directions.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/directions.mif" opened with dimensions 42921x3x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/index.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/index.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/index.mif" opened with dimensions 123x129x87x2, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998x1, datatype UInt32LE
fixelcfestats: [DEBUG] memory-mapping file "fd/directions.mif"...
fixelcfestats: [DEBUG] file "fd/directions.mif" mapped at 0x10d7a4000, size 515052 (read-only)
fixelcfestats: [DEBUG] image "fd/directions.mif" loaded
fixelcfestats: [DEBUG] image "fd/directions.mif" initialised with strides = [ -1 42921 128763 ], start = 42920, using indirect IO
fixelcfestats: [INFO] opening image "stats_fd_PatLess/directions.mif"...
fixelcfestats: [DEBUG] reading key/value file "stats_fd_PatLess/directions.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "stats_fd_PatLess/directions.mif" opened with dimensions 42921x3x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [DEBUG] memory-mapping file "stats_fd_PatLess/directions.mif"...
fixelcfestats: [DEBUG] file "stats_fd_PatLess/directions.mif" mapped at 0x10d82a000, size 515052 (read-only)
fixelcfestats: [DEBUG] image "stats_fd_PatLess/directions.mif" loaded
fixelcfestats: [DEBUG] image "stats_fd_PatLess/directions.mif" initialised with strides = [ -1 42921 128763 ], start = 42920, using indirect IO
fixelcfestats: [DEBUG] unmapping file "stats_fd_PatLess/directions.mif"
fixelcfestats: [DEBUG] image "stats_fd_PatLess/directions.mif" unloaded
fixelcfestats: [DEBUG] unmapping file "fd/directions.mif"
fixelcfestats: [DEBUG] image "fd/directions.mif" unloaded
fixelcfestats: [INFO] opening image "fd/index.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/index.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/index.mif" opened with dimensions 123x129x87x2, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998x1, datatype UInt32LE
fixelcfestats: [INFO] opening image "fd/C01_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C01_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C01_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C02_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C02_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C02_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C04_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C04_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C04_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C05_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C05_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C05_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C06_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C06_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C06_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C07_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C07_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C07_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C08_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C08_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C08_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C09_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C09_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C09_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C10_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C10_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C10_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C11_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C11_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C11_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C12_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C12_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C12_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C13_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C13_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C13_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C14_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C14_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C14_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C16_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C16_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C16_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C17_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C17_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C17_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C18_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C18_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C18_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C19_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C19_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C19_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C20_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C20_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C20_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/C21_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/C21_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/C21_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D01_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D01_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D01_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D02_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D02_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D02_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D03_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D03_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D03_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D04_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D04_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D04_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D05_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D05_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D05_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D06_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D06_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D06_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D07_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D07_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D07_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D08_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D08_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D08_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D09_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D09_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D09_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D10_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D10_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D10_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D11_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D11_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D11_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D12_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D12_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D12_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D13_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D13_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D13_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D14_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D14_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D14_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D15_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D15_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D15_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D16_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D16_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D16_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D17_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D17_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D17_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D18_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D18_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D18_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D19_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D19_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D19_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/D21_fd.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/D21_fd.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/D21_fd.mif" opened with dimensions 42921x1x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/directions.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/directions.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/directions.mif" opened with dimensions 42921x3x1, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998, datatype Float32LE
fixelcfestats: [INFO] opening image "fd/index.mif"...
fixelcfestats: [DEBUG] reading key/value file "fd/index.mif"...
fixelcfestats: [DEBUG] sanitising image information...
fixelcfestats: [INFO] image "fd/index.mif" opened with dimensions 123x129x87x2, voxel spacing 2.66262x2.7682000000000002x2.7807499999999998x1, datatype UInt32LE
fixelcfestats: [DEBUG] memory-mapping file "fd/directions.mif"...
fixelcfestats: [DEBUG] file "fd/directions.mif" mapped at 0x10d8b0000, size 515052 (read-only)
fixelcfestats: [DEBUG] image "fd/directions.mif" loaded
fixelcfestats: [DEBUG] image "fd/directions.mif" initialised with strides = [ -1 42921 128763 ], start = 42920, using indirect IO
fixelcfestats: [DEBUG] initialising threads...
fixelcfestats: [DEBUG] launching 8 threads "loop threads"...
fixelcfestats: [100%] preloading data for "fd/directions.mif"...
fixelcfestats: [DEBUG] waiting for completion of threads "loop threads"...
fixelcfestats: [DEBUG] threads "loop threads" completed OK
fixelcfestats: [100%] preloading data for "fd/directions.mif"
fixelcfestats: [DEBUG] image "fd/directions.mif" initialised with strides = [ 3 1 128763 ], start = 0, using direct IO
fixelcfestats: [100%] loading template fixel directions and positions
fixelcfestats: [DEBUG] unmapping file "fd/directions.mif"
fixelcfestats: [DEBUG] image "fd/directions.mif" unloaded
fixelcfestats: [DEBUG] unmapping file "fixel_mask/directions.mif"
fixelcfestats: [DEBUG] image "fixel_mask/directions.mif" unloaded
fixelcfestats: [DEBUG] unmapping file "fd/index.mif"
fixelcfestats: [DEBUG] image "fd/index.mif" unloaded
D21_fd.mif: File name too longuery file "fd/C01_fd.mif