Output full FODs to file

Is there a way to output the FODs projected onto the sphere that we use in mrview? The FOD mif files only contain the SH coefficients.
Any help is appreciated.


Hi @Goku,

The SH coefficients are actually the most complete representation of the FODs we output: they contain information about any possible orientation’s amplitude. But if you’re after outputting actual amplitudes for a set of directions (which is what I interpret your question as), the sh2amp command is what you’re looking for. It allows you to input any SH coefficient file, such as the FOD ones in your case, and output amplitudes for a specified set of orientations. You’ll need to input such a set of orientations of course as well.


Thanks exactly what I was looking for!

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