Hello MRtrix3 experts,
I have been trying to compare the effects of optic nerve crush on the left eye versus the right eye of the same subject as the control. A cluster shows up there on one side of the brain in the hippocampal region in the t-score file. My goal is to generate tracts connecting certain section of the hippocampal region to the whole brain. I have obtained an image which may be showing the tracts. But my issue is the visualization. I would like to see the streamlines interacting with each slices of the main image whereas when I am rotating the tractography file, it seems there’s no interaction between the slices and the streamlines at all. I would appreciate the help.
