Tckgen tractography space

1

Hi, MRtrix3 community

I’m trying to follow the HCP tutorial https://mrtrix.readthedocs.io/en/dev/quantitative_structural_connectivity/ismrm_hcp_tutorial.html. I had a question about the .tck file generated with the tckgen command. Are the tracts generated in world coordinates?

Thanks
Shreya

2

Yes! This means you can display them along with aligned scans of the same patient without headaches!

NB: you accidentally posted this as a wiki entry, I moved it to the ‘uncategorized’ category.

3

Thank you very much for your reply and moving it to the correct category.