I apologize for posting here since I am unable to post a new thread for some reason (perhaps my account is new).
I just started exploring the BIDS app for MRtrix3_connectome, downloaded a singularity image for it, and tried to use the following commands to get it running:
unset PYTHONPATH export PYTHONNOUSERSITE=1 dataDIR=/PROJECTS/data_PILOT sing_img=/PROJECTS/singularity/mrtrix3_connectome.simg module load singularity cd $dataDIR singularity run -B /PROJECTS:/PROJECTS $sing_img $dataDIR $dataDIR/output participant --participant_label sub-pilot20190225 --parcellation desikan
This is a BIDS validated dataset, however, I am getting the following
error:/.singularity.d/runscript: 3: exec: /mrtrix3_connectome.py: Exec format error
Does anyone know how this can be fixed? I am sorry but I am very new to MRtrix3. Thanks for your help.