Hi Manuel,
Thanks very much for your reply. I tried downloading the dev branch but there are no compile or build scripts made when I follow these steps for the dev branch.
git clone GitHub - MRtrix3/mrtrix3: MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
cd mrtrix3
git checkout dev # <== switch over to the dev branch
git pull # <== make sure that branch is up to date with remote
./configure
./build
The master branch works fine, it is just an issue when switching over to the dev branch (similar problem to this post): Build dev latest version
Thanks!
Trina