|
Question about pipeline structure and use of already co-registered T1 and DWI images Hello everyone, I am currently building a pipeline for tractography and connectome generation using MRtrix3, and I have a few questions regarding the correct workflow
|
|
0
|
29
|
March 11, 2026
|
|
Generating orientation dispersion entropy
|
|
0
|
16
|
March 10, 2026
|
|
Download and installation issues( Windows10)
|
|
1
|
39
|
March 9, 2026
|
|
Deterministic tractography in MRtrix3
|
|
3
|
97
|
February 26, 2026
|
|
Systematic FD offset between baseline and post-intervention timepoints in longitudinal FBA
|
|
0
|
14
|
February 19, 2026
|
|
SS3T estimated WM in GM regions on infant scan w/ low b-value?
|
|
0
|
20
|
February 19, 2026
|
|
Phase encoding direction from Philips Achieva
|
|
10
|
4158
|
February 18, 2026
|
|
Diffusion spectrum imaging data for MSMT-CSD
|
|
1
|
39
|
February 10, 2026
|
|
Problem creating colour-coded DTI maps with MRtrix
|
|
5
|
1368
|
February 3, 2026
|
|
Interpretation of TFNBS excel file
|
|
0
|
19
|
February 3, 2026
|
|
Configuration Error - Eigen - C++14
|
|
1
|
63
|
February 2, 2026
|
|
Is it valid to mix single-tissue and multi-tissue FODs in population_template?
|
|
1
|
26
|
February 2, 2026
|
|
Fixel Based Analysis for lower b values?
|
|
1
|
28
|
February 2, 2026
|
|
CSD metrics for quality assurance for a large connectomics project
|
|
0
|
26
|
February 2, 2026
|
|
Rationale for initial group-average in population_template vs. external template
|
|
0
|
17
|
January 28, 2026
|
|
Advice on Combining TBSS and ComBat
|
|
0
|
22
|
January 23, 2026
|
|
DKI black voxels
|
|
0
|
33
|
January 19, 2026
|
|
Targeted Structural Connectivity Analysis
|
|
1
|
48
|
January 17, 2026
|
|
FBA template mask creation with subset of participants
|
|
1
|
92
|
January 9, 2026
|
|
The problem about the template mask in FBA
|
|
0
|
25
|
January 9, 2026
|
|
Update: Registration Open: IST Winter School 2026 (Hands-on Tractography) – Verona, Italy
|
|
0
|
98
|
January 7, 2026
|
|
Coregistration
|
|
1
|
36
|
January 7, 2026
|
|
Can the voxel size of the 5ttseg.mif file generated from the T1 structural image（1mm） be different from that of the align.mif（2mm） diffusion image file?
|
|
1
|
32
|
December 22, 2025
|
|
Fiber tracts for corpus callosum
|
|
2
|
87
|
December 12, 2025
|
|
Probabilistic tractography on high-res dMRI data not providing good enough results
|
|
1
|
60
|
December 12, 2025
|
|
Visualization of Asymmetric Orientation Distributions with mrview
|
|
2
|
79
|
December 9, 2025
|
|
FBA question regarding FD PRE and IN
|
|
2
|
37
|
December 9, 2025
|
|
Vermis_CrusI (Region of Interest 9) and other Regions of Interest (ROIs) in the connectivity matrix
|
|
2
|
40
|
December 9, 2025
|
|
How to register the SUIT cerebellar parcellation template to the individual T1 space thank you
|
|
3
|
69
|
December 9, 2025
|
|
Tcktransform combining several linear & non-linear transformation matrices
|
|
1
|
42
|
December 9, 2025
|