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MSMT-CSD Tractography Issue - Missing Tracks in Cortex (Ex-vivo Mouse Brain)
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1
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42
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November 18, 2025
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FBA design / contrast matrices for three groups
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21
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4415
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November 18, 2025
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Eddy not correcting movement
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1
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50
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November 18, 2025
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Tckconvert on whole-brain tractogram
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1
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31
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November 18, 2025
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HCP data generation connectome
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5
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393
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November 18, 2025
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Random Qt5 plugins linking issue
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2
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686
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November 18, 2025
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WM_FOD and ROIs dimension matching, is it essential during tckgen based tractogram generation?
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2
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33
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November 18, 2025
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High-Resolution Atlas Registration Failure (Bleeding) with FNIRT/MRtrix on HCP-style Data
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1
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29
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November 18, 2025
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Population template to match existing template
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1
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46
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November 18, 2025
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Runing dwifslpreproc in MRtrix version 3.0.8, an error occurs: mean_of_first_b0: Zero mean
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2
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43
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November 18, 2025
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5ttgen hsvs error
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1
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37
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November 18, 2025
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Zero-filled volumes after applytopup within dwifslpreproc
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1
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15
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November 18, 2025
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Dwifslpreproc fails to generate acquisition parameters file
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1
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39
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November 18, 2025
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Registration of AAL atlas to subjects' T1
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4
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2969
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October 31, 2025
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Conversion of streamlines from trk to tck
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21
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10628
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October 29, 2025
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About Multishell dMRI processing
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1
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57
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October 27, 2025
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Running a full MRTRIX processing pipeline from AP and PA DICOMS
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8
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1685
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November 18, 2025
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Trouble running eddy_cuda on hpc cluster
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0
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19
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October 23, 2025
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Dwifslpreproc fails with "unknown option -import_pe_table" (MRtrix3 3.0.7)
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3
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146
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October 14, 2025
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Conversion between mif and nifti format
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1
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64
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October 12, 2025
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Fixel Based Analysis Results
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1
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51
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October 12, 2025
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Visualization of significant results and overlap of multiple fibre bundles
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2
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66
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October 10, 2025
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Mrview crashes on Mac
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1
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33
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October 10, 2025
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Polysynaptic Tractography Advice
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2
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74
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October 6, 2025
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Windows 11 "Looking for compiler [clang++]: not found"
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4
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131
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October 1, 2025
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Tck2connctome default settings
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4
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76
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September 29, 2025
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Guidance on FBA pipeline for single-group ROI-to-ROI connectivity analysis
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1
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55
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September 28, 2025
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No streamlines between pairs of ROIs in normative connectome (Elias et al. 2024) — single-ROI include works, dual-ROI include returns zero
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1
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42
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September 23, 2025
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Error - eddy preprocessing
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3
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156
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September 18, 2025
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Tract being truncated between -seed and -include masks
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4
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44
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September 15, 2025
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